Description
Overview
Integrated into Illumina Connected Analytics, Illumina Connected Analytics Cohorts combines multiomic and phenotypic data in a single place to allow for greater analysis of cohorts and increase novel research insights. Illumina Connected Analytics Cohorts delivers:
Access to highly curated public data sets, including TCGA, Broad RGP, DRAGEN 1kGP, and GEO
Fresh data and filtering criteria to existing cohorts without the need to start from scratch
Simple visual tools to select and visualize cohorts, avoiding the need for complex querying
Feasibility analysis of the cohort to ensure the cohort definition is complete for downstream statistical analysis (GWAS, PheWAS)
Simplify data structuring
Leverage data models for combining genomic and phenotypic data and access professional services for custom loading and harmonization.
Quickly select cohort criteria
Use the browser to find the right subjects for your cohort and integrate genomic and phenotypic data to review summary statistics.
Seamlessly integrate workflows
Easily access workflows, including DRAGEN pipelines, and export to Illumina Connected Analytics Bench for enhanced data science studies.
Software updates
Detect and Lift Genome Build: Cohorts documentation provides set-up instructions to convert hg19/GRCh37 VCFs to GRCh38 before import into Cohorts
Attribute Queries: Improved the user experience choosing a range of values for numerical attributes when defining a cohort
Export Cohort to ICA Project Data: Improved the user experience exporting list of subjects that match cohort definition criteria to their ICA project for further analysis
Subject Selection in Analysis Visualization: Users can follow the link for subject counts in the needle plot to view a list of subjects carrying the selected variant or mutation
Applications
Illumina Connected Analytics Cohorts combines subject- and sample-level metadata with molecular data to perform tertiary analyses on selected subsets of individuals for a wide variety of applications, including drug discovery, cancer research, and more.
Software product portfolio
Clarity LIMS
Efficient sample tracking and workflow management for genomics labs.
BaseSpace Sequence Hub
Streamlined cloud-based run setup and monitoring.
Local Run Manager
Intuitive on-instrument run setup and monitoring.
Illumina Connected Analytics
A secure, scalable bioinformatics platform for seamless sequencer integration and flexible workflows.
DRAGEN secondary analysis
Accurate, comprehensive, and efficient analysis of NGS data.
DRAGEN Array
Accurate, comprehensive and efficient secondary analysis for Infinium microarray-based assays.
BaseSpace Apps
BaseSpace Sequence Hub offers a wide variety of NGS data analysis apps for common Illumina sequencing methods.
Emedgene
Emedgene streamlines tertiary analysis workflows for rare disease genomics and other germline research applications.
Correlation Engine
An interactive omics knowledge base and data search engine that puts private data into biological context with highly curated public omics data.
Related applications and methods
Multiomics
Use multiomics profiling to multiply discovery power and better connect genotype to phenotype.
Variant analysis
Our variant annotation and analysis software tools can help researchers extract and report biological insights from large volumes of genomic data.
NGS for drug development
Advances using Illumina Connected Analytics Cohorts
Using whole-genome sequencing to study early-onset Parkinson’s Disease
NysnoBio is developing a gene therapy to slow progression of Parkinson's disease in people under age 50.
Illumina Connected Analytics Cohorts: Multiomic cancer workflow demo
Learn how Illumina Connected Analytics Cohorts helps researchers build a case and control oncology cohort definition out of complex datasets.
Plans and pricing
An Illumina Connected Analytics license is required. There is no additional cost in iCredits, storage, or consumption for Illumina Connected Analytics Cohorts.
Learn more about:
iCredits
Illumina Connected Analytics
* 250 iCredits expire after 30-day introductory trial. ** Available for systems with control software that support Universal Copy Service. Not available for all legacy systems.
Rapidly and easily build and explore cohorts
Illumina Connected Analytics Cohorts provides a friendly user interface for filtering and visualizing genomic and phenotypic data of cohorts. Easily evaluate data comparisons for feasibility analysis on select cohort definition.
Resources
Connecting multiomics data with informatics
In this webinar, you’ll hear bioinformatics experts discuss multiomics data set integration challenges, tools to overcome these challenges, and informatics hurdles yet to be resolved.
Using analytics to improve cancer research
Learn how the Genomics Platform Group uses Illumina Connected Analytics to transform sequencing workflows by optimizing analytics pipelines and collaborating in a secure, compliant data environment.
ICA Cohorts
20065842
Illumina Connected Analytics (ICA) Cohorts empowers scientists to analyze aggregated genomic data to understand genotype-phenotype relationships, identify potential disease drivers, and discover new biomarkers. View less
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Can data and reports in Illumina Connected Analytics be shared with colleagues?
If a study has been loaded into the Illumina Connected Analytics Cohorts, customer administrators can select permission to share the study with collaborators.
Can private data be imported into Illumina Connected Analytics Cohorts?
Yes. Private data can be imported into the Illumina Connected Analytics Cohorts and analyzed independently or combined with public data to expand cohort analysis.
What type of data does Cohorts support?
Illumina Connected Analytics Cohorts supports genomic data from DNA sequencing (eg, single nucleotide changes, CNV, germline, and somatic calls) and RNA-Seq (eg, TPM and differential expression) studies, phenotypic data of medical attributes (eg, demographics, medical history, and therapeutic interventions), and over 27,000 subject-level data sets across public databases (eg, TCGA, Broad RGP, DRAGEN 1kGP, and GEO).
Frequently purchased
Other products to consider
* 250 iCredits expire after 30-day introductory trial. ** Available for systems with control software that support Universal Copy Service. Not available for all legacy systems.
