20090205, Illumina and Genoscreen Deeplex Myc-TB Combo Kit with Nextera XT library prep, 48 sample

Name: Illumina and Genoscreen Deeplex Myc-TB Combo Kit with Nextera XT library prep, 48 sample
Brand: Illumina
SKU: 20090205

Illumina and Genoscreen Deeplex Myc-TB Combo Kit is a multiplex PCR panel used with NGS for M. tuberculosis and associated drug resistance markers. It includes the PCR panel, Nextera XT library prep, indexes, and software access.

Catalog Number: 20090205

Pricing

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Category

NGS Index/Barcode Kits

TagsSequencing kits Library preparation kits Illumina GenoScreen Deeplex® Myc-TB Assay with LP and Indexes

Description

Overview
The Illumina and GenoScreen Deeplex® Myc-TB Combo Kit is a targeted next-generation sequencing panel for the identification of Mycobacterium tuberculosis complex (MTBC) strains, mycobacterial species identification, genotyping, and prediction of drug resistance mutations of MTBC strains. Data analysis is included via a cloud-based Deeplex® software web application with results visualization. Two kit options are available based on which library prep is desired.
Identification of resistance mutations to 15 anti-tuberculosis drugs
Genotyping and spoligotyping of MTBC strains to determine lineage and sublineage of strains present in a sample
Identification of >140 mycobacterial species and detection of co-infections with distinct species
Total turnaround time less than 48 hours directly from sputum with no need to perform culture
Combo kits contain either Illumina DNA Prep (IDP) or Nextera XT library prep, plus the Deeplex® Myc-TB multiplex panel, indexes, and bioinformatic analysis. Choose the SKU that includes the library prep you prefer.

Example workflow
Illumina and GenoScreen Deeplex® Myc-TB Combo Kit
iSeq 100 System
MiniSeq System
MiSeq System
NextSeq 550 System

Related applications and methods
Tuberculosis sequencing
Next-generation sequencing is advancing the detection, characterization, and surveillance of drug-resistant tuberculosis strains.
Antimicrobial resistance detection
Next-generation sequencing offers high-throughput capabilities to identify genomic changes associated with antimicrobial resistance.
Public health surveillance
Genomics can advance public health and wellness by detecting and characterizing new, emerging, and circulating pathogens.

Specifications

General

Assay time	< 48 hr from sample to completed analysis
Input quantity	9 pg DNA
Description	PCR panel, library prep, indexes and bioinformatics analysis for identification of mycobacterium tuberculosis and mutations associated with antimicrobial resistance from sputum samples or mycobacterial cultures. Access to detailed interactive cloud-based software included in kit.
Instruments	MiSeq System , iSeq 100 System , NextSeq 550 System , MiSeqDx in Research Mode , MiniSeq System , NextSeq 550Dx in Research Mode , NextSeq 500 System , MiSeq i100 System , MiSeq i100 Plus System
Mechanism of action	Multiplex PCR
Method	Targeted DNA sequencing
Multiplexing	Varies by instrument
Nucleic acid type	DNA
Number of amplicons	24
Species category	Bacteria
Technology	Sequencing

Ordering

Notice

Unless otherwise stated, the minimum order amount is USD 1,000.
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